Update the nix-shell environment (#13316)

* Nix: Allow calls to `bin/qmk` even when the build was started by `qmk`

The `$PATH` modifications performed by the Nix wrapper for the `qmk`
executable prevent `bin/qmk` from working properly (the changed `$PATH`
contains a wrong `python3` executable which does not have the needed
Python modules in its module path).  As a workaround, disable the
generation of that wrapper for the `qmk` Python package (there is yet
another wrapper generated while building the Python environment, which
would still set the Python module path properly when running `qmk`).

Although `bin/qmk` is officially deprecated, QMK CLI still invokes it in
some cases (at least `qmk doctor` and `qmk pytest`), therefore keeping
these invocations working is useful.

* Nix: Update `util/nix/pyproject.toml` to match `requirements*.txt`

Update the Python dependency information used by Poetry to match the
current state of the qmk_firmware code.

* Nix: Bump QMK CLI dependency to 1.0.0; bump other Python deps

Update Python dependencies for nix-shell to the most recent releases:

 - dotty-dict: 1.3.0 -> no longer used
 - milc: 1.4.2 -> 1.6.2
 - pep8-naming: 0.11.1 -> 0.12.1
 - pygments: 2.9.0 -> 2.10.0
 - pyrsistent: 0.17.3 -> 0.18.0
 - pyusb: 1.1.1 -> 1.2.1
 - setuptools-scm: 6.0.1 -> no longer used
 - qmk: 0.1.0 -> 1.0.0
 - qmk-dotty-dict: not used -> 1.3.0.post1
 - yapf: 0.30.0 -> 0.31.0

Note to self: The command to update Python dependencies changed to:

    ( cd util/nix && nix run 'nixpkgs#poetry' -- update --lock )

2 files changed, 79 insertions, 74 deletions

diff --git a/util/nix/poetry.lock b/util/nix/poetry.lock
index 1a1aefe21a..9bb0f64deb 100644
--- a/util/nix/poetry.lock
+++ b/util/nix/poetry.lock
@@ -43,7 +43,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 name = "coverage"
 version = "5.5"
 description = "Code coverage measurement for Python"
-category = "main"
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
 
@@ -51,21 +51,10 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, <4"
 toml = ["toml"]
 
 [[package]]
-name = "dotty-dict"
-version = "1.3.0"
-description = "Dictionary wrapper for quick access to deeply nested keys."
-category = "main"
-optional = false
-python-versions = "*"
-
-[package.dependencies]
-setuptools_scm = "*"
-
-[[package]]
 name = "flake8"
 version = "3.9.2"
 description = "the modular source code checker: pep8 pyflakes and co"
-category = "main"
+category = "dev"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
 
@@ -151,13 +140,13 @@ colorama = ">=0.3.9"
 name = "mccabe"
 version = "0.6.1"
 description = "McCabe checker, plugin for flake8"
-category = "main"
+category = "dev"
 optional = false
 python-versions = "*"
 
 [[package]]
 name = "milc"
-version = "1.4.2"
+version = "1.6.2"
 description = "Opinionated Batteries-Included Python 3 CLI Framework."
 category = "main"
 optional = false
@@ -174,7 +163,7 @@ spinners = "*"
 name = "nose2"
 version = "0.10.0"
 description = "unittest2 with plugins, the succesor to nose"
-category = "main"
+category = "dev"
 optional = false
 python-versions = "*"
 
@@ -188,20 +177,21 @@ dev = ["Sphinx (>=1.6.5)", "sphinx-rtd-theme", "mock", "coverage"]
 
 [[package]]
 name = "pep8-naming"
-version = "0.11.1"
+version = "0.12.1"
 description = "Check PEP-8 naming conventions, plugin for flake8"
 category = "dev"
 optional = false
 python-versions = "*"
 
 [package.dependencies]
+flake8 = ">=3.9.1"
 flake8-polyfill = ">=1.0.2,<2"
 
 [[package]]
 name = "pycodestyle"
 version = "2.7.0"
 description = "Python style guide checker"
-category = "main"
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
@@ -209,13 +199,13 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 name = "pyflakes"
 version = "2.3.1"
 description = "passive checker of Python programs"
-category = "main"
+category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 
 [[package]]
 name = "pygments"
-version = "2.9.0"
+version = "2.10.0"
 description = "Pygments is a syntax highlighting package written in Python."
 category = "main"
 optional = false
@@ -223,50 +213,44 @@ python-versions = ">=3.5"
 
 [[package]]
 name = "pyrsistent"
-version = "0.17.3"
+version = "0.18.0"
 description = "Persistent/Functional/Immutable data structures"
 category = "main"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.6"
 
 [[package]]
 name = "pyusb"
-version = "1.1.1"
+version = "1.2.1"
 description = "Python USB access module"
 category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.6.0"
 
 [[package]]
 name = "qmk"
-version = "0.0.51"
+version = "1.0.0"
 description = "A program to help users work with QMK Firmware."
 category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = "*"
 
 [package.dependencies]
-dotty-dict = "*"
-flake8 = "*"
 hid = "*"
 hjson = "*"
 jsonschema = ">=3"
-milc = ">=1.4.0"
-nose2 = "*"
+milc = ">=1.4.2"
 pygments = "*"
 pyusb = "*"
-yapf = "*"
+qmk-dotty-dict = "*"
 
 [[package]]
-name = "setuptools-scm"
-version = "6.0.1"
-description = "the blessed package to manage your versions by scm tags"
+name = "qmk-dotty-dict"
+version = "1.3.0.post1"
+description = "Dictionary wrapper for quick access to deeply nested keys."
 category = "main"
 optional = false
-python-versions = ">=3.6"
-
-[package.extras]
-toml = ["toml"]
+python-versions = "*"
 
 [[package]]
 name = "six"
@@ -294,16 +278,16 @@ python-versions = "*"
 
 [[package]]
 name = "yapf"
-version = "0.30.0"
+version = "0.31.0"
 description = "A formatter for Python code."
-category = "main"
+category = "dev"
 optional = false
 python-versions = "*"
 
 [metadata]
 lock-version = "1.1"
 python-versions = "^3.8"
-content-hash = "5e181d51536240d08c74ba6a46bd0988ee4ca72ac3d5b388965ca8023e9b9a99"
+content-hash = "468ae51aaddfe2ce62938f131c688bbc447e41608d4dd7d30db36391c38bda20"
 
 [metadata.files]
 appdirs = [
@@ -376,9 +360,6 @@ coverage = [
     {file = "coverage-5.5-pp37-none-any.whl", hash = "sha256:2a3859cb82dcbda1cfd3e6f71c27081d18aa251d20a17d87d26d4cd216fb0af4"},
     {file = "coverage-5.5.tar.gz", hash = "sha256:ebe78fe9a0e874362175b02371bdfbee64d8edc42a044253ddf4ee7d3c15212c"},
 ]
-dotty-dict = [
-    {file = "dotty_dict-1.3.0.tar.gz", hash = "sha256:eb0035a3629ecd84397a68f1f42f1e94abd1c34577a19cd3eacad331ee7cbaf0"},
-]
 flake8 = [
     {file = "flake8-3.9.2-py2.py3-none-any.whl", hash = "sha256:bf8fd333346d844f616e8d47905ef3a3384edae6b4e9beb0c5101e25e3110907"},
     {file = "flake8-3.9.2.tar.gz", hash = "sha256:07528381786f2a6237b061f6e96610a4167b226cb926e2aa2b6b1d78057c576b"},
@@ -412,16 +393,16 @@ mccabe = [
     {file = "mccabe-0.6.1.tar.gz", hash = "sha256:dd8d182285a0fe56bace7f45b5e7d1a6ebcbf524e8f3bd87eb0f125271b8831f"},
 ]
 milc = [
-    {file = "milc-1.4.2-py2.py3-none-any.whl", hash = "sha256:65ee004caa769b1ee144b15be7908d1f623920ab6f356e5c5c95be9457aa15d8"},
-    {file = "milc-1.4.2.tar.gz", hash = "sha256:c6b2f19e3196b00a0060f8c883533e356f2054a9f81692b7b97ccee0d01626fd"},
+    {file = "milc-1.6.2-py2.py3-none-any.whl", hash = "sha256:cb26404c7f3d6797c9c42005de732161e45e21294cde85845e914b279321bdad"},
+    {file = "milc-1.6.2.tar.gz", hash = "sha256:779710a0b9300bef3c5748158887e6c734659e147d55548d9e4701d7a7d5dddf"},
 ]
 nose2 = [
     {file = "nose2-0.10.0-py2.py3-none-any.whl", hash = "sha256:aa620e759f2c5018d9ba041340391913e282ecebd3c392027f1575847b093ec6"},
     {file = "nose2-0.10.0.tar.gz", hash = "sha256:886ba617a96de0130c54b24479bd5c2d74d5c940d40f3809c3a275511a0c4a60"},
 ]
 pep8-naming = [
-    {file = "pep8-naming-0.11.1.tar.gz", hash = "sha256:a1dd47dd243adfe8a83616e27cf03164960b507530f155db94e10b36a6cd6724"},
-    {file = "pep8_naming-0.11.1-py2.py3-none-any.whl", hash = "sha256:f43bfe3eea7e0d73e8b5d07d6407ab47f2476ccaeff6937c84275cd30b016738"},
+    {file = "pep8-naming-0.12.1.tar.gz", hash = "sha256:bb2455947757d162aa4cad55dba4ce029005cd1692f2899a21d51d8630ca7841"},
+    {file = "pep8_naming-0.12.1-py2.py3-none-any.whl", hash = "sha256:4a8daeaeb33cfcde779309fc0c9c0a68a3bbe2ad8a8308b763c5068f86eb9f37"},
 ]
 pycodestyle = [
     {file = "pycodestyle-2.7.0-py2.py3-none-any.whl", hash = "sha256:514f76d918fcc0b55c6680472f0a37970994e07bbb80725808c17089be302068"},
@@ -432,23 +413,43 @@ pyflakes = [
     {file = "pyflakes-2.3.1.tar.gz", hash = "sha256:f5bc8ecabc05bb9d291eb5203d6810b49040f6ff446a756326104746cc00c1db"},
 ]
 pygments = [
-    {file = "Pygments-2.9.0-py3-none-any.whl", hash = "sha256:d66e804411278594d764fc69ec36ec13d9ae9147193a1740cd34d272ca383b8e"},
-    {file = "Pygments-2.9.0.tar.gz", hash = "sha256:a18f47b506a429f6f4b9df81bb02beab9ca21d0a5fee38ed15aef65f0545519f"},
+    {file = "Pygments-2.10.0-py3-none-any.whl", hash = "sha256:b8e67fe6af78f492b3c4b3e2970c0624cbf08beb1e493b2c99b9fa1b67a20380"},
+    {file = "Pygments-2.10.0.tar.gz", hash = "sha256:f398865f7eb6874156579fdf36bc840a03cab64d1cde9e93d68f46a425ec52c6"},
 ]
 pyrsistent = [
-    {file = "pyrsistent-0.17.3.tar.gz", hash = "sha256:2e636185d9eb976a18a8a8e96efce62f2905fea90041958d8cc2a189756ebf3e"},
+    {file = "pyrsistent-0.18.0-cp36-cp36m-macosx_10_9_x86_64.whl", hash = "sha256:f4c8cabb46ff8e5d61f56a037974228e978f26bfefce4f61a4b1ac0ba7a2ab72"},
+    {file = "pyrsistent-0.18.0-cp36-cp36m-manylinux1_i686.whl", hash = "sha256:da6e5e818d18459fa46fac0a4a4e543507fe1110e808101277c5a2b5bab0cd2d"},
+    {file = "pyrsistent-0.18.0-cp36-cp36m-manylinux1_x86_64.whl", hash = "sha256:5e4395bbf841693eaebaa5bb5c8f5cdbb1d139e07c975c682ec4e4f8126e03d2"},
+    {file = "pyrsistent-0.18.0-cp36-cp36m-win32.whl", hash = "sha256:527be2bfa8dc80f6f8ddd65242ba476a6c4fb4e3aedbf281dfbac1b1ed4165b1"},
+    {file = "pyrsistent-0.18.0-cp36-cp36m-win_amd64.whl", hash = "sha256:2aaf19dc8ce517a8653746d98e962ef480ff34b6bc563fc067be6401ffb457c7"},
+    {file = "pyrsistent-0.18.0-cp37-cp37m-macosx_10_9_x86_64.whl", hash = "sha256:58a70d93fb79dc585b21f9d72487b929a6fe58da0754fa4cb9f279bb92369396"},
+    {file = "pyrsistent-0.18.0-cp37-cp37m-manylinux1_i686.whl", hash = "sha256:4916c10896721e472ee12c95cdc2891ce5890898d2f9907b1b4ae0f53588b710"},
+    {file = "pyrsistent-0.18.0-cp37-cp37m-manylinux1_x86_64.whl", hash = "sha256:73ff61b1411e3fb0ba144b8f08d6749749775fe89688093e1efef9839d2dcc35"},
+    {file = "pyrsistent-0.18.0-cp37-cp37m-win32.whl", hash = "sha256:b29b869cf58412ca5738d23691e96d8aff535e17390128a1a52717c9a109da4f"},
+    {file = "pyrsistent-0.18.0-cp37-cp37m-win_amd64.whl", hash = "sha256:097b96f129dd36a8c9e33594e7ebb151b1515eb52cceb08474c10a5479e799f2"},
+    {file = "pyrsistent-0.18.0-cp38-cp38-macosx_10_9_x86_64.whl", hash = "sha256:772e94c2c6864f2cd2ffbe58bb3bdefbe2a32afa0acb1a77e472aac831f83427"},
+    {file = "pyrsistent-0.18.0-cp38-cp38-manylinux1_i686.whl", hash = "sha256:c1a9ff320fa699337e05edcaae79ef8c2880b52720bc031b219e5b5008ebbdef"},
+    {file = "pyrsistent-0.18.0-cp38-cp38-manylinux1_x86_64.whl", hash = "sha256:cd3caef37a415fd0dae6148a1b6957a8c5f275a62cca02e18474608cb263640c"},
+    {file = "pyrsistent-0.18.0-cp38-cp38-win32.whl", hash = "sha256:e79d94ca58fcafef6395f6352383fa1a76922268fa02caa2272fff501c2fdc78"},
+    {file = "pyrsistent-0.18.0-cp38-cp38-win_amd64.whl", hash = "sha256:a0c772d791c38bbc77be659af29bb14c38ced151433592e326361610250c605b"},
+    {file = "pyrsistent-0.18.0-cp39-cp39-macosx_10_9_x86_64.whl", hash = "sha256:d5ec194c9c573aafaceebf05fc400656722793dac57f254cd4741f3c27ae57b4"},
+    {file = "pyrsistent-0.18.0-cp39-cp39-manylinux1_i686.whl", hash = "sha256:6b5eed00e597b5b5773b4ca30bd48a5774ef1e96f2a45d105db5b4ebb4bca680"},
+    {file = "pyrsistent-0.18.0-cp39-cp39-manylinux1_x86_64.whl", hash = "sha256:48578680353f41dca1ca3dc48629fb77dfc745128b56fc01096b2530c13fd426"},
+    {file = "pyrsistent-0.18.0-cp39-cp39-win32.whl", hash = "sha256:f3ef98d7b76da5eb19c37fda834d50262ff9167c65658d1d8f974d2e4d90676b"},
+    {file = "pyrsistent-0.18.0-cp39-cp39-win_amd64.whl", hash = "sha256:404e1f1d254d314d55adb8d87f4f465c8693d6f902f67eb6ef5b4526dc58e6ea"},
+    {file = "pyrsistent-0.18.0.tar.gz", hash = "sha256:773c781216f8c2900b42a7b638d5b517bb134ae1acbebe4d1e8f1f41ea60eb4b"},
 ]
 pyusb = [
-    {file = "pyusb-1.1.1-py3-none-any.whl", hash = "sha256:f18eb813d3a1439918071234589162c2f209a19adbeffeb1377ce078a4aebc70"},
-    {file = "pyusb-1.1.1.tar.gz", hash = "sha256:7d449ad916ce58aff60b89aae0b65ac130f289c24d6a5b7b317742eccffafc38"},
+    {file = "pyusb-1.2.1-py3-none-any.whl", hash = "sha256:2b4c7cb86dbadf044dfb9d3a4ff69fd217013dbe78a792177a3feb172449ea36"},
+    {file = "pyusb-1.2.1.tar.gz", hash = "sha256:a4cc7404a203144754164b8b40994e2849fde1cfff06b08492f12fff9d9de7b9"},
 ]
 qmk = [
-    {file = "qmk-0.0.51-py2.py3-none-any.whl", hash = "sha256:5f676f389b2450b0956d7eb8e7e378d2e6690d5859a887c91876da0a5faf75ed"},
-    {file = "qmk-0.0.51.tar.gz", hash = "sha256:efeef209cde1df92b9823db686d9684962cd00aae9f45ba5e3d494aa5b3c6b9a"},
+    {file = "qmk-1.0.0-py2.py3-none-any.whl", hash = "sha256:63d69b97a533d91b0cfa7887e68cac7df52c6f7bddf4bf44d17ef1241d85ffff"},
+    {file = "qmk-1.0.0.tar.gz", hash = "sha256:da62eec73c4548cc37b0b9be3937202dc3a301dc2f2663610ecca751a610f9ca"},
 ]
-setuptools-scm = [
-    {file = "setuptools_scm-6.0.1-py3-none-any.whl", hash = "sha256:c3bd5f701c8def44a5c0bfe8d407bef3f80342217ef3492b951f3777bd2d915c"},
-    {file = "setuptools_scm-6.0.1.tar.gz", hash = "sha256:d1925a69cb07e9b29416a275b9fadb009a23c148ace905b2fb220649a6c18e92"},
+qmk-dotty-dict = [
+    {file = "qmk_dotty_dict-1.3.0.post1-py3-none-any.whl", hash = "sha256:a9cb7fc3ff9631190fee0ecac14986a0ac7b4b6892347dc9d7486a4c4ea24492"},
+    {file = "qmk_dotty_dict-1.3.0.post1.tar.gz", hash = "sha256:3b611e393660bfaa6835c68e94784bae80fe07b8490978b5ecab03a0d2fc7ea2"},
 ]
 six = [
     {file = "six-1.16.0-py2.py3-none-any.whl", hash = "sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254"},
@@ -462,6 +463,6 @@ termcolor = [
     {file = "termcolor-1.1.0.tar.gz", hash = "sha256:1d6d69ce66211143803fbc56652b41d73b4a400a2891d7bf7a1cdf4c02de613b"},
 ]
 yapf = [
-    {file = "yapf-0.30.0-py2.py3-none-any.whl", hash = "sha256:3abf61ba67cf603069710d30acbc88cfe565d907e16ad81429ae90ce9651e0c9"},
-    {file = "yapf-0.30.0.tar.gz", hash = "sha256:3000abee4c28daebad55da6c85f3cd07b8062ce48e2e9943c8da1b9667d48427"},
+    {file = "yapf-0.31.0-py2.py3-none-any.whl", hash = "sha256:e3a234ba8455fe201eaa649cdac872d590089a18b661e39bbac7020978dd9c2e"},
+    {file = "yapf-0.31.0.tar.gz", hash = "sha256:408fb9a2b254c302f49db83c59f9aa0b4b0fd0ec25be3a5c51181327922ff63d"},
 ]
diff --git a/util/nix/pyproject.toml b/util/nix/pyproject.toml
index a813361893..1ec8aacd4a 100644
--- a/util/nix/pyproject.toml
+++ b/util/nix/pyproject.toml
@@ -9,23 +9,27 @@ authors = []
 
 [tool.poetry.dependencies]
 python = "^3.8"
-appdirs = "^1.4.4"
-argcomplete = "^1.12.2"
-colorama = "^0.4.4"
-dotty-dict = "^1.3.0"
-hjson = "^3.0.2"
-jsonschema = "^3.2.0"
-milc = "^1.3.0"
-Pygments = "^2.8.0"
+appdirs = "*"
+argcomplete = "*"
+colorama = "*"
+hid = "*"
+hjson = "*"
+jsonschema = ">=3"
+milc = ">=1.4.2"
+Pygments = "*"
+pyusb = "*"
+qmk-dotty-dict = "*"
+
+# This dependency is not mentioned in requirements.txt (QMK CLI is not a
+# library package that is required by the Python code in qmk_firmware), but is
+# required to build a proper nix-shell environment.
 qmk = "*"
 
 [tool.poetry.dev-dependencies]
-nose2 = "^0.10.0"
-flake8 = "^3.8.4"
-hid = "^1.0.4"
-pep8-naming = "^0.11.1"
-pyusb = "^1.1.1"
-yapf = "^0.30.0"
+nose2 = "*"
+flake8 = "*"
+pep8-naming = "*"
+yapf = "*"
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]